Department of Biological and Geographical Sciences

  • United Kingdom

Research Output

A Case of Insect Colonization Before the Death

Vanin, S., Bonizzoli, M., Migliaccio, M. L., Buoninsegni, L. T., Bugelli, V., Pinchi, V. & Focardi, M., Nov 2017, In : Journal of Forensic Sciences. 62, 6, p. 1665-1667 3 p.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

A Centriolar FGR1 Oncogene Partner-Like Protein Required for Paraflagellar Rod Assembly, But Not Axoneme Assembly in African Trypanosomes: Trypanosome FOPL function

Harmer, J., Towers, K., Addison, M., Vaughan, S., Ginger, M. L. & McKean, P. G., 1 Jul 2018, In : Open Biology. 8, 7, 13 p., 170218.

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)

A Clinical and Biological Guide for Understanding Chemotherapy-Induced Alopecia and Its Prevention

Dunnill, C., Al Tameemi, W., Collett, A., Haslam, I. & Georgopoulos, N., Jan 2018, In : Oncologist. 23, 1, p. 84-96 13 p.

Research output: Contribution to journalReview article

Open Access
12 Citations (Scopus)

A collaborative exercise on DNA methylation based body fluid typing

Jung, S. E., Cho, S., Antunes, J., Gomes, I., Uchimoto, M. L., Oh, Y. N., Di Giacomo, L., Schneider, P. M., Park, M. S., van der Meer, D., Williams, G., McCord, B., Ahn, H. J., Choi, D. H., Lee, Y. H., Lee, S. D. & Lee, H. Y., 1 Oct 2016, In : Electrophoresis. 37, 21, p. 2759-2766 8 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

A combined protocol for identification of maggots of forensic interest

Tuccia, F., Giordani, G. & Vanin, S., Jul 2016, In : Science and Justice. 56, 4, p. 264-268 5 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

A computational model of the LGI1 protein suggests a common binding site for ADAM proteins

Leonardi, E., Andreazza, S., Vanin, S., Busolin, G., Nobile, C. & Tosatto, S. C. E., 29 Mar 2011, In : PLoS One. 6, 3, 13 p., e18142.

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)

Acute toxicity tests using earthworms to estimate ecological quality of compost and digestate

Pivato, A., Lavagnolo, M. C., Manachini, B., Raga, R., Beggio, G. & Vanin, S., 1 Jan 2018, In : Journal of Material Cycles and Waste Management. 20, 1, p. 552-560 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A dispersal of Homo sapiens from southern to eastern Africa immediately preceded the out-of-Africa migration

Rito, T., Vieira, D., Soares Da Silva, M., Conde-Sousa, E., Pereira, L., Mellars, P., Richards, M. & Soares, P., 18 Mar 2019, In : Scientific Reports. 9, 1, 10 p., 4728.

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)

Advances in Forensic Entomology in Missing Persons Investigations

Vanin, S., 20 Dec 2016, Handbook of Missing Persons. Springer International Publishing AG, p. 309-317 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Citations (Scopus)

A general review of the most common COI primers for Calliphoridae identification in forensic entomology

Tuccia, F., Giordani, G. & Vanin, S., Sep 2016, In : Forensic Science International: Genetics. 24, p. e9-e11 3 p.

Research output: Contribution to journalLetter

4 Citations (Scopus)

A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals

Silva, M., Oliveira, M., Vieira, D., Brandão, A., Rito, T., Pereira, J. B., Fraser, R. M., Hudson, B., Gandini, F., Edwards, C., Pala, M., Koch, J., Wilson, J. F., Pereira, L., Richards, M. B. & Soares, P., 23 Mar 2017, In : BMC Evolutionary Biology. 17, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

Open Access
26 Citations (Scopus)

A genetic contribution from the Far East into Ashkenazi Jews via the ancient Silk Road

Tian, J. Y., Wang, H. W., Li, Y. C., Zhang, W., Yao, Y. G., Van Straten, J., Richards, M. B. & Kong, Q. P., 11 Feb 2015, In : Scientific Reports. 5, 8377.

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)

A Genetic Perspective on African Prehistory

Soares, P., Rito, T., Pereira, L. & Richards, M., 4 Mar 2016, Africa from MIS 6-2: Population Dynamics and Paleoenvironments. Jones, S. & Stewart, B. (eds.). 1 ed. Springer Netherlands, p. 383-405 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

11 Citations (Scopus)

A Genome-wide Association Study of Dupuytren Disease Reveals 17 Additional Variants Implicated in Fibrosis

Ng, M., Thakkar, D., Southam, L., Werker, P. M., Ophoff, R., Becker, K., Nothnagel, M., Franke, A., Nürnberg, P., Espirito-Santo, A. I., Izadi, D., Hennies, H., Nanchahal, J., Zeggini, E. & Furniss, D., 7 Sep 2017, In : American Journal of Human Genetics. 101, 3, p. 417-427 11 p.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)

A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

Southworth, J., Grace, C., Marron, A., Fatima, N. & Carr, M., 23 Nov 2019, In : Mobile DNA. 10, 19 p., 44.

Research output: Contribution to journalArticle

Open Access

Airyscan Superresolution Microscopy to Study Trypanosomatid Cell Biology

Harmer, J., Belbelazi, A., Carr, M. & Ginger, M., 28 Mar 2020, Trypanosomatids: Methods and Protocols. Michels, P. A. M., Ginger, M. L. & Zilberstein, D. (eds.). Humana Press, Vol. 2116. p. 449-461 13 p. (Methods in Molecular Biology; vol. 2116).

Research output: Chapter in Book/Report/Conference proceedingChapter

A Life-Line for the Pedagogic Goose: Harnessing the Graduate Perspective in Arts Education

Tinker, A., Greenhough, K. & Caldwell, E., 26 Nov 2018, In : Arts. 7, 4, 12 p., 88.

Research output: Contribution to journalArticle

Open Access

A mitochondrial stratigraphy for Island Southeast Asia

Hill, C., Soares, P., Mormina, M., Macaulay, V., Clarke, D., Blumbach, P. B., Vizuete-Forster, M., Forster, P., Bulbeck, D., Oppenheimer, S. & Richards, M., Jan 2007, In : American Journal of Human Genetics. 80, 1, p. 29-43 15 p.

Research output: Contribution to journalArticle

167 Citations (Scopus)

Analysis of Base Excision and Single-Strand Break Repair Activities in Trypanosomatid Extracts

Kania, D., Ginger, M. & Allinson, S., 28 Mar 2020, Trypanosomatids: Methods and Protocols. Michels, P. A. M., Ginger, M. L. & Zilberstein, D. (eds.). Humana Press, Vol. 2116. p. 353-364 12 p. (Methods in Molecular Biology; vol. 2116).

Research output: Chapter in Book/Report/Conference proceedingChapter

Analysis of phenazepam and 3-hydroxyphenazepam in post-mortem fluids and tissues

Crichton, M. L., Shenton, C. F., Drummond, G., Beer, L. J., Seetohul, L. N. & Maskell, P. D., Oct 2015, In : Drug Testing and Analysis. 7, 10, p. 926-36 11 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

An approach to modelling the impact of 14C release from reactor graphite in a geological disposal facility

Doulgeris, C., Humphreys, P. & Rout, S., Dec 2015, In : Mineralogical Magazine. 79, 6, p. 1495-1503

Research output: Contribution to journalArticle

7 Citations (Scopus)

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

Frantz, L. A. F., Haile, J., Lin, A. T., Scheu, A., Geörg, C., Benecke, N., Alexander, M., Linderholm, A., Mullin, V. E., Daly, K. G., Battista, V. M., Price, M., Gron, K. J., Alexandri, P., Arbogast, R. M., Arbuckle, B., Bǎlǎşescu, A., Barnett, R., Bartosiewicz, L., Baryshnikov, G. & 80 others, Bonsall, C., Borić, D., Boroneanţ, A., Bulatović, J., Çakirlar, C., Carretero, J. M., Chapman, J., Church, M., Crooijmans, R., De Cupere, B., Detry, C., Dimitrijevic, V., Dumitraşcu, V., Du Plessis, L., Edwards, C. J., Erek, C. M., Erim-Özdoǧan, A., Ervynck, A., Fulgione, D., Gligor, M., Götherström, A., Gourichon, L., Groenen, M. A. M., Helmer, D., Hongo, H., Horwitz, L. K., Irving-Pease, E. K., Lebrasseur, O., Lesur, J., Malone, C., Manaseryan, N., Marciniak, A., Martlew, H., Mashkour, M., Matthews, R., Matuzeviciute, G. M., Maziar, S., Meijaard, E., McGovern, T., Megens, H. J., Miller, R., Mohaseb, A. F., Orschiedt, J., Orton, D., Papathanasiou, A., Pearson, M. P., Pinhasi, R., Radmanović, D., Ricaut, F. X., Richards, M., Sabin, R., Sarti, L., Schier, W., Sheikhi, S., Stephan, E., Stewart, J. R., Stoddart, S., Tagliacozzo, A., Tasić, N., Trantalidou, K., Tresset, A., Valdiosera, C., Van Den Hurk, Y., Van Poucke, S., Vigne, J. D., Yanevich, A., Zeeb-Lanz, A., Triantafyllidis, A., Gilbert, M. T. P., Schibler, J., Rowley-Conwy, P., Zeder, M., Peters, J., Cucchi, T., Bradley, D. G., Dobney, K., Burger, J., Evin, A., Girdland-Flink, L. & Larson, G., 27 Aug 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 35, p. 17231-17238 8 p.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)

Ancient voyaging and polynesian origins

Soares, P., Rito, T., Trejaut, J. A., Mormina, M., Hill, C., Tinkler-Hundal, E., Braid, M., Clarke, D. J., Loo, J., Thomson, N., Denham, T., Donohue, M., Macaulay, V., Lin, M., Oppenheimer, S. & Richards, M. B., 11 Feb 2011, In : American Journal of Human Genetics. 88, 2, p. 239-247 9 p.

Research output: Contribution to journalArticle

105 Citations (Scopus)

An Efficient and User-Friendly Implementation of the Founder Analysis Methodology

Vieira, D., Almeida, M., Richards, M. B. & Soares, P., 22 Jun 2019, Practical Applications of Computational Biology and Bioinformatics: 13th International Conference, PACBB 2019. Mohamad, M. S., Zaki, N., Castellanos-Garzón, J. A., Fdez-Riverola, F. & Rocha, M. (eds.). Springer Verlag, p. 121-128 8 p. (Advances in Intelligent Systems and Computing; vol. 1005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An evaluation of the infection control potential of a UV clinical podiatry unit

Humphreys, P. N., Davies, C. S. & Rout, S., 1 Dec 2014, In : Journal of Foot and Ankle Research. 7, 1

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

An evolutionary ratchet leading to loss of elongation factors in eukaryotes

Atkinson, G. C., Kuzmenko, A., Chicherin, I., Soosaar, A., Tenson, T., Carr, M., Kamenski, P. & Hauryliuk, V., 24 Feb 2014, In : BMC Evolutionary Biology. 14, 1, 35.

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)

An iron-catalysed C-C bond-forming spirocyclization cascade providing sustainable access to new 3D heterocyclic frameworks

Adams, K., Ball, A. K., Birkett, J., Brown, L., Chappell, B., Gill, D. M., Lo, P. K. T., Patmore, N. J., Rice, C. R., Ryan, J., Raubo, P. & Sweeney, J. B., 1 Apr 2017, In : Nature Chemistry. 9, 4, p. 396-401 6 p.

Research output: Contribution to journalArticle

21 Citations (Scopus)
24 Citations (Scopus)

A novel mammalian glucokinase exhibiting exclusive inorganic polyphosphate dependence in the cell nucleus

Ali, A., Wathes, D. C., Swali, A., Burns, H. & Burns, S., 1 Dec 2017, In : Biochemistry and Biophysics Reports. 12, p. 151-157 7 p.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

A Novel Method for the Analysis of Slash Cuts to Clothing

Bostock, E., Parkes, G. & Williams, G., 23 Sep 2013, In : The International Open Access Journal of Forensic Research. 4, 5, 7 p., 1000197.

Research output: Contribution to journalArticle

Open Access

A novel rhamnose-rich hetero-exopolysaccharide isolated from Lactobacillus paracasei DG activates THP-1 human monocytic cells

Balzaretti, S., Taverniti, V., Guglielmetti, S., Fiore, W., Minuzzo, M., Ngo, H. N., Ngere, J. B., Sadiq, S., Humphreys, P. N. & Laws, A. P., 1 Jan 2017, In : Applied and Environmental Microbiology. 83, 2, p. AEM.02702-16 28 p.

Research output: Contribution to journalArticle

Open Access
37 Citations (Scopus)

A novel workflow for three-dimensional analysis of tumour cell migration

Ketchen, S., Rohwedder, A., Knipp, S., Esteves, F., Struve, N., Peckham, M., Ladbury, J., Curd, A., Short, S. & Bruning-Richardson, A., 6 Apr 2020, In : Interface Focus. 10, 2, 6 p., 20190070.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Anoxic Biodegradation of Isosaccharinic Acids at Alkaline pH by Natural Microbial Communities

Rout, S. P., Charles, C. J., Doulgeris, C., Mccarthy, A. J., Rooks, D. J., Loughnane, J. P., Laws, A. P. & Humphreys, P. N., 14 Sep 2015, In : PLoS One. 10, 9, e0137682.

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)

A Polar Surface Eddy Obscured by Thermal Stratification

Porter, M., Henley, S., Orkney, A., Bouman, H., Hwang, B. P., Dumont, E., Venables, E. J. & Cottier, F., 28 Mar 2020, In : Geophysical Research Letters. 47, 6, 9 p., e2019GL086281.

Research output: Contribution to journalArticle

Open Access

Applicability of Heavy-Metal Phytoextraction in United Arab Emirates: An Investigation of Candidate Species

Alyazouri, A., Jewsbury, R., Tayim, H., Humphreys, P. & Al-sayah, M. H., Jan 2014, In : Soil and Sediment Contamination. 23, 5, p. 557-570

Research output: Contribution to journalArticle

3 Citations (Scopus)

Aquaporin Expression Contributes to Human Transurothelial Permeability In Vitro and Is Modulated by NaCl

Rubenwolf, P. C., Georgopoulos, N. T., Kirkwood, L. A., Baker, S. C. & Southgate, J., 24 Sep 2012, In : PLoS One. 7, 9, 8 p., e45339.

Research output: Contribution to journalArticle

Open Access
22 Citations (Scopus)

Archaeal DNA polymerases: new frontiers in DNA replication and repair

Cooper, C., Dec 2018, In : Emerging Topics in Life Sciences . 2, 4, p. 503-516 14 p., ETLS-2018-0015CR1.

Research output: Contribution to journalReview article

Open Access
File

Archaeogenetic and Palaeogenetic Evidence for Metal Age Mobility in Europe

Pala, M., Soares, P. & Richards, M., 2016, Celtic from the West 3: Atlantic Europe in the Metal Ages — questions of shared language . Koch, J. & Cunliffe, B. (eds.). Oxbow Books, p. 321-344

Research output: Chapter in Book/Report/Conference proceedingChapter

Archaeogenetics

Pala, M., Soares, P., Chaubey, G. & Richards, M., May 2015, The Cambridge World History: Volume 2: A World with Agriculture, 12,000 BCE - 500 CE. Barker, G. & Goucher, C. (eds.). Cambridge University Press, Vol. 2. p. 1-25

Research output: Chapter in Book/Report/Conference proceedingChapter

Are all rivers equal? The role of education in attitudes towards temporary and perennial rivers

Leigh, C., Boersma, K., Galatowitsch, M., Milner, V. & Stubbington, R., 1 Jun 2019, In : People and Nature. 1, 2, p. 181-190 10 p.

Research output: Contribution to journalArticle

Open Access

A redox state-dictated signalling pathway deciphers the malignant cell specificity of CD40-mediated apoptosis

Dunnill, C. J., Ibraheem, K., Mohamed, A., Southgate, J. & Georgopoulos, N. T., 2017, In : Oncogene. 36, p. 2515-2528 14 p.

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)
13 Citations (Scopus)

A Signal, from Human mtDNA, of Postglacial Recolonization in Europe

Torroni, A., Bandelt, H. J., Macaulay, V., Richards, M., Cruciani, F., Rengo, C., Martinez-Cabrera, V., Villems, R., Kivisild, T., Metspalu, E., Parik, J., Tolk, H. V., Tambets, K., Forster, P., Karger, B., Francalacci, P., Rudan, P., Janicijevic, B., Rickards, O., Savontaus, M. L. & 13 others, Huoponen, K., Laitinen, V., Koivumäki, S., Sykes, B., Hickey, E., Novelletto, A., Moral, P., Sellitto, D., Coppa, A., Al-Zaheri, N., Santachiara-Benerecetti, A. S., Semino, O. & Scozzari, R., Oct 2001, In : American Journal of Human Genetics. 69, 4, p. 844-852 9 p.

Research output: Contribution to journalArticle

Open Access
217 Citations (Scopus)

A six-gene phylogeny provides new insights into choanoflagellate evolution

Carr, M., Richter, D. J., Fozouni, P., Smith, T. J., Jeuck, A., Leadbeater, B. S. C. & Nitsche, F., Feb 2017, In : Molecular Phylogenetics and Evolution. 107, p. 166-178 13 p.

Research output: Contribution to journalArticle

Open Access
17 Citations (Scopus)

Assessing the potential of short rotation coppice (SRC) for cleanup of radionuclide-contaminated sites

Dutton, M. V. & Humphreys, P. N., Oct 2005, In : International Journal of Phytoremediation. 7, 4, p. 279-293 15 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Assessment of compost dosage in farmland through ecotoxicological tests

Pivato, A., Raga, R., Lavagnolo, M. C., Vanin, S., Barausse, A., Palmeri, L. & Cossu, R., 1 Apr 2016, In : Journal of Material Cycles and Waste Management. 18, 2, p. 303-317 15 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Assessment of compost quality for its environmentally safe use by means of an ecotoxicological test on a soil organism

Pivato, A., Raga, R., Vanin, S. & Rossi, M., 2014, In : Journal of Material Cycles and Waste Management. 16, 4, p. 763-774 12 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Association of Leukotriene A4 Hydrolase with Tuberculosis Susceptibility Using Genomic Data in Portugal

Rito, T., Ferreira, J., Cavadas, B., Soares, P., Oliveira, O., Richards, M. B., Duarte, R., Pereira, L. & Correia-Neves, M., 4 Dec 2019, In : Microorganisms. 7, 12, 8 p., 650.

Research output: Contribution to journalArticle

Open Access
Open Access
5 Citations (Scopus)