Department of Biological and Geographical Sciences

  • United Kingdom

Research Output

Article

A Case of Insect Colonization Before the Death

Vanin, S., Bonizzoli, M., Migliaccio, M. L., Buoninsegni, L. T., Bugelli, V., Pinchi, V. & Focardi, M., Nov 2017, In : Journal of Forensic Sciences. 62, 6, p. 1665-1667 3 p.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

A Centriolar FGR1 Oncogene Partner-Like Protein Required for Paraflagellar Rod Assembly, But Not Axoneme Assembly in African Trypanosomes: Trypanosome FOPL function

Harmer, J., Towers, K., Addison, M., Vaughan, S., Ginger, M. L. & McKean, P. G., 1 Jul 2018, In : Open Biology. 8, 7, 13 p., 170218.

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)

A collaborative exercise on DNA methylation based body fluid typing

Jung, S. E., Cho, S., Antunes, J., Gomes, I., Uchimoto, M. L., Oh, Y. N., Di Giacomo, L., Schneider, P. M., Park, M. S., van der Meer, D., Williams, G., McCord, B., Ahn, H. J., Choi, D. H., Lee, Y. H., Lee, S. D. & Lee, H. Y., 1 Oct 2016, In : Electrophoresis. 37, 21, p. 2759-2766 8 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

A combined protocol for identification of maggots of forensic interest

Tuccia, F., Giordani, G. & Vanin, S., 1 Jul 2016, In : Science and Justice. 56, 4, p. 264-268 5 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

A computational model of the LGI1 protein suggests a common binding site for ADAM proteins

Leonardi, E., Andreazza, S., Vanin, S., Busolin, G., Nobile, C. & Tosatto, S. C. E., 29 Mar 2011, In : PLoS One. 6, 3, 13 p., e18142.

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)

Acute toxicity tests using earthworms to estimate ecological quality of compost and digestate

Pivato, A., Lavagnolo, M. C., Manachini, B., Raga, R., Beggio, G. & Vanin, S., 1 Jan 2018, In : Journal of Material Cycles and Waste Management. 20, 1, p. 552-560 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A dispersal of Homo sapiens from southern to eastern Africa immediately preceded the out-of-Africa migration

Rito, T., Vieira, D., Soares Da Silva, M., Conde-Sousa, E., Pereira, L., Mellars, P., Richards, M. & Soares, P., 18 Mar 2019, In : Scientific Reports. 9, 1, 10 p., 4728.

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)

A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals

Silva, M., Oliveira, M., Vieira, D., Brandão, A., Rito, T., Pereira, J. B., Fraser, R. M., Hudson, B., Gandini, F., Edwards, C., Pala, M., Koch, J., Wilson, J. F., Pereira, L., Richards, M. B. & Soares, P., 23 Mar 2017, In : BMC Evolutionary Biology. 17, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

Open Access
29 Citations (Scopus)

A genetic contribution from the Far East into Ashkenazi Jews via the ancient Silk Road

Tian, J. Y., Wang, H. W., Li, Y. C., Zhang, W., Yao, Y. G., Van Straten, J., Richards, M. B. & Kong, Q. P., 11 Feb 2015, In : Scientific Reports. 5, 8377.

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)

A Genome-wide Association Study of Dupuytren Disease Reveals 17 Additional Variants Implicated in Fibrosis

Ng, M., Thakkar, D., Southam, L., Werker, P. M., Ophoff, R., Becker, K., Nothnagel, M., Franke, A., Nürnberg, P., Espirito-Santo, A. I., Izadi, D., Hennies, H., Nanchahal, J., Zeggini, E. & Furniss, D., 7 Sep 2017, In : American Journal of Human Genetics. 101, 3, p. 417-427 11 p.

Research output: Contribution to journalArticle

Open Access
17 Citations (Scopus)

A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

Southworth, J., Grace, C., Marron, A., Fatima, N. & Carr, M., 23 Nov 2019, In : Mobile DNA. 10, 19 p., 44.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

A Life-Line for the Pedagogic Goose: Harnessing the Graduate Perspective in Arts Education

Tinker, A., Greenhough, K. & Caldwell, E., 26 Nov 2018, In : Arts. 7, 4, 12 p., 88.

Research output: Contribution to journalArticle

Open Access

A mitochondrial stratigraphy for Island Southeast Asia

Hill, C., Soares, P., Mormina, M., Macaulay, V., Clarke, D., Blumbach, P. B., Vizuete-Forster, M., Forster, P., Bulbeck, D., Oppenheimer, S. & Richards, M., Jan 2007, In : American Journal of Human Genetics. 80, 1, p. 29-43 15 p.

Research output: Contribution to journalArticle

167 Citations (Scopus)

Analysis of phenazepam and 3-hydroxyphenazepam in post-mortem fluids and tissues

Crichton, M. L., Shenton, C. F., Drummond, G., Beer, L. J., Seetohul, L. N. & Maskell, P. D., Oct 2015, In : Drug Testing and Analysis. 7, 10, p. 926-36 11 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

An approach to modelling the impact of 14C release from reactor graphite in a geological disposal facility

Doulgeris, C., Humphreys, P. & Rout, S., Dec 2015, In : Mineralogical Magazine. 79, 6, p. 1495-1503

Research output: Contribution to journalArticle

7 Citations (Scopus)

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

Frantz, L. A. F., Haile, J., Lin, A. T., Scheu, A., Geörg, C., Benecke, N., Alexander, M., Linderholm, A., Mullin, V. E., Daly, K. G., Battista, V. M., Price, M., Gron, K. J., Alexandri, P., Arbogast, R. M., Arbuckle, B., Bǎlǎşescu, A., Barnett, R., Bartosiewicz, L., Baryshnikov, G. & 80 others, Bonsall, C., Borić, D., Boroneanţ, A., Bulatović, J., Çakirlar, C., Carretero, J. M., Chapman, J., Church, M., Crooijmans, R., De Cupere, B., Detry, C., Dimitrijevic, V., Dumitraşcu, V., Du Plessis, L., Edwards, C. J., Erek, C. M., Erim-Özdoǧan, A., Ervynck, A., Fulgione, D., Gligor, M., Götherström, A., Gourichon, L., Groenen, M. A. M., Helmer, D., Hongo, H., Horwitz, L. K., Irving-Pease, E. K., Lebrasseur, O., Lesur, J., Malone, C., Manaseryan, N., Marciniak, A., Martlew, H., Mashkour, M., Matthews, R., Matuzeviciute, G. M., Maziar, S., Meijaard, E., McGovern, T., Megens, H. J., Miller, R., Mohaseb, A. F., Orschiedt, J., Orton, D., Papathanasiou, A., Pearson, M. P., Pinhasi, R., Radmanović, D., Ricaut, F. X., Richards, M., Sabin, R., Sarti, L., Schier, W., Sheikhi, S., Stephan, E., Stewart, J. R., Stoddart, S., Tagliacozzo, A., Tasić, N., Trantalidou, K., Tresset, A., Valdiosera, C., Van Den Hurk, Y., Van Poucke, S., Vigne, J. D., Yanevich, A., Zeeb-Lanz, A., Triantafyllidis, A., Gilbert, M. T. P., Schibler, J., Rowley-Conwy, P., Zeder, M., Peters, J., Cucchi, T., Bradley, D. G., Dobney, K., Burger, J., Evin, A., Girdland-Flink, L. & Larson, G., 27 Aug 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 35, p. 17231-17238 8 p.

Research output: Contribution to journalArticle

Open Access
13 Citations (Scopus)

Ancient voyaging and polynesian origins

Soares, P., Rito, T., Trejaut, J. A., Mormina, M., Hill, C., Tinkler-Hundal, E., Braid, M., Clarke, D. J., Loo, J., Thomson, N., Denham, T., Donohue, M., Macaulay, V., Lin, M., Oppenheimer, S. & Richards, M. B., 11 Feb 2011, In : American Journal of Human Genetics. 88, 2, p. 239-247 9 p.

Research output: Contribution to journalArticle

105 Citations (Scopus)

A near 90-year record of the evolution of El Morado Glacier and its proglacial lake, Central Chilean Andes

Farías-Barahona, D., Wilson, R., Bravo, C., Vivero, S., Caro, A., Shaw, T., Casassa, G., Ayala, Á., Mejías, A., Harrison, S., Glasser, N. F., McPhee, J., Wündrich, O. & Braun, M., 18 Aug 2020, In : Journal of Glaciology. 15 p.

Research output: Contribution to journalArticle

Open Access

An evaluation of the infection control potential of a UV clinical podiatry unit

Humphreys, P. N., Davies, C. S. & Rout, S., 1 Dec 2014, In : Journal of Foot and Ankle Research. 7, 1

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

An evolutionary ratchet leading to loss of elongation factors in eukaryotes

Atkinson, G. C., Kuzmenko, A., Chicherin, I., Soosaar, A., Tenson, T., Carr, M., Kamenski, P. & Hauryliuk, V., 24 Feb 2014, In : BMC Evolutionary Biology. 14, 1, 35.

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)

An iron-catalysed C-C bond-forming spirocyclization cascade providing sustainable access to new 3D heterocyclic frameworks

Adams, K., Ball, A. K., Birkett, J., Brown, L., Chappell, B., Gill, D. M., Lo, P. K. T., Patmore, N. J., Rice, C. R., Ryan, J., Raubo, P. & Sweeney, J. B., 1 Apr 2017, In : Nature Chemistry. 9, 4, p. 396-401 6 p.

Research output: Contribution to journalArticle

21 Citations (Scopus)
25 Citations (Scopus)

A novel mammalian glucokinase exhibiting exclusive inorganic polyphosphate dependence in the cell nucleus

Ali, A., Wathes, D. C., Swali, A., Burns, H. & Burns, S., 1 Dec 2017, In : Biochemistry and Biophysics Reports. 12, p. 151-157 7 p.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

A Novel Method for the Analysis of Slash Cuts to Clothing

Bostock, E., Parkes, G. & Williams, G., 23 Sep 2013, In : The International Open Access Journal of Forensic Research. 4, 5, 7 p., 1000197.

Research output: Contribution to journalArticle

Open Access

A novel rhamnose-rich hetero-exopolysaccharide isolated from Lactobacillus paracasei DG activates THP-1 human monocytic cells

Balzaretti, S., Taverniti, V., Guglielmetti, S., Fiore, W., Minuzzo, M., Ngo, H. N., Ngere, J. B., Sadiq, S., Humphreys, P. N. & Laws, A. P., 1 Jan 2017, In : Applied and Environmental Microbiology. 83, 2, p. AEM.02702-16 28 p.

Research output: Contribution to journalArticle

Open Access
44 Citations (Scopus)

A novel workflow for three-dimensional analysis of tumour cell migration

Ketchen, S., Rohwedder, A., Knipp, S., Esteves, F., Struve, N., Peckham, M., Ladbury, J., Curd, A., Short, S. & Bruning-Richardson, A., 6 Apr 2020, In : Interface Focus. 10, 2, 6 p., 20190070.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Anoxic Biodegradation of Isosaccharinic Acids at Alkaline pH by Natural Microbial Communities

Rout, S. P., Charles, C. J., Doulgeris, C., Mccarthy, A. J., Rooks, D. J., Loughnane, J. P., Laws, A. P. & Humphreys, P. N., 14 Sep 2015, In : PLoS One. 10, 9, e0137682.

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)

A Polar Surface Eddy Obscured by Thermal Stratification

Porter, M., Henley, S., Orkney, A., Bouman, H., Hwang, B. P., Dumont, E., Venables, E. J. & Cottier, F., 28 Mar 2020, In : Geophysical Research Letters. 47, 6, 9 p., e2019GL086281.

Research output: Contribution to journalArticle

Open Access

Applicability of Heavy-Metal Phytoextraction in United Arab Emirates: An Investigation of Candidate Species

Alyazouri, A., Jewsbury, R., Tayim, H., Humphreys, P. & Al-sayah, M. H., Jan 2014, In : Soil and Sediment Contamination. 23, 5, p. 557-570

Research output: Contribution to journalArticle

5 Citations (Scopus)

Aquaporin Expression Contributes to Human Transurothelial Permeability In Vitro and Is Modulated by NaCl

Rubenwolf, P. C., Georgopoulos, N. T., Kirkwood, L. A., Baker, S. C. & Southgate, J., 24 Sep 2012, In : PLoS One. 7, 9, 8 p., e45339.

Research output: Contribution to journalArticle

Open Access
22 Citations (Scopus)

Are all rivers equal? The role of education in attitudes towards temporary and perennial rivers

Leigh, C., Boersma, K., Galatowitsch, M., Milner, V. & Stubbington, R., 1 Jun 2019, In : People and Nature. 1, 2, p. 181-190 10 p.

Research output: Contribution to journalArticle

Open Access

A redox state-dictated signalling pathway deciphers the malignant cell specificity of CD40-mediated apoptosis

Dunnill, C. J., Ibraheem, K., Mohamed, A., Southgate, J. & Georgopoulos, N. T., 2017, In : Oncogene. 36, p. 2515-2528 14 p.

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)
13 Citations (Scopus)

A Signal, from Human mtDNA, of Postglacial Recolonization in Europe

Torroni, A., Bandelt, H. J., Macaulay, V., Richards, M., Cruciani, F., Rengo, C., Martinez-Cabrera, V., Villems, R., Kivisild, T., Metspalu, E., Parik, J., Tolk, H. V., Tambets, K., Forster, P., Karger, B., Francalacci, P., Rudan, P., Janicijevic, B., Rickards, O., Savontaus, M. L. & 13 others, Huoponen, K., Laitinen, V., Koivumäki, S., Sykes, B., Hickey, E., Novelletto, A., Moral, P., Sellitto, D., Coppa, A., Al-Zaheri, N., Santachiara-Benerecetti, A. S., Semino, O. & Scozzari, R., Oct 2001, In : American Journal of Human Genetics. 69, 4, p. 844-852 9 p.

Research output: Contribution to journalArticle

Open Access
218 Citations (Scopus)

A six-gene phylogeny provides new insights into choanoflagellate evolution

Carr, M., Richter, D. J., Fozouni, P., Smith, T. J., Jeuck, A., Leadbeater, B. S. C. & Nitsche, F., Feb 2017, In : Molecular Phylogenetics and Evolution. 107, p. 166-178 13 p.

Research output: Contribution to journalArticle

Open Access
17 Citations (Scopus)

Assessing the potential of short rotation coppice (SRC) for cleanup of radionuclide-contaminated sites

Dutton, M. V. & Humphreys, P. N., Oct 2005, In : International Journal of Phytoremediation. 7, 4, p. 279-293 15 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Assessment of compost dosage in farmland through ecotoxicological tests

Pivato, A., Raga, R., Lavagnolo, M. C., Vanin, S., Barausse, A., Palmeri, L. & Cossu, R., 1 Apr 2016, In : Journal of Material Cycles and Waste Management. 18, 2, p. 303-317 15 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Assessment of compost quality for its environmentally safe use by means of an ecotoxicological test on a soil organism

Pivato, A., Raga, R., Vanin, S. & Rossi, M., 2014, In : Journal of Material Cycles and Waste Management. 16, 4, p. 763-774 12 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Association of Leukotriene A4 Hydrolase with Tuberculosis Susceptibility Using Genomic Data in Portugal

Rito, T., Ferreira, J., Cavadas, B., Soares, P., Oliveira, O., Richards, M. B., Duarte, R., Pereira, L. & Correia-Neves, M., 4 Dec 2019, In : Microorganisms. 7, 12, 8 p., 650.

Research output: Contribution to journalArticle

Open Access
Open Access
5 Citations (Scopus)

A substantial prehistoric European ancestry amongst Ashkenazi maternal lineages

Costa, M. D., Pereira, J. B., Pala, M., Fernandes, V., Olivieri, A., Achilli, A., Perego, U. A., Rychkov, S., Naumova, O., Hatina, J., Woodward, S. R., Eng, K. K., MacAulay, V., Carr, M., Soares, P., Pereira, L. & Richards, M. B., 8 Oct 2013, In : Nature Communications. 4, p. 1-10 10 p., 2543.

Research output: Contribution to journalArticle

Open Access
50 Citations (Scopus)

A systematic comparison of antimicrobial wound dressings using a planktonic cell and an immobilized cell model

Shoukat, K., Pilling, S., Rout, S., Bradbury, J. & Humphreys, P., 1 Dec 2015, In : Journal of Applied Microbiology. 119, 6, p. 1552-1560

Research output: Contribution to journalArticle

A Y Chromosome Census of the British Isles

Capelli, C., Redhead, N., Abernethy, J. K., Gratrix, F., Wilson, J. F., Moen, T., Hervig, T., Richards, M., Stumpf, M. P. H., Underhill, P. A., Bradshaw, P., Shaha, A., Thomas, M. G., Bradman, N. & Goldstein, D. B., 27 May 2003, In : Current Biology. 13, 11, p. 979-984 6 p.

Research output: Contribution to journalArticle

Open Access
102 Citations (Scopus)

Baobab polysaccharides from fruits and leaves

Alba, K., Offiah, V., Laws, A. P., Falade, K. O. & Kontogiorgos, V., 1 Sep 2020, In : Food Hydrocolloids. 106, 8 p., 105874.

Research output: Contribution to journalArticle

Bathing Suit Variant of Autosomal Recessive Congenital Ichthyosis (ARCI) in Two Indian patients

Sathishkumar, D., Peter, D., Pulimood, S., Wiegmann, H., Valentin, F., Thomas, M., Hennies, H. C. & Oji, V., 30 Dec 2018, In : Case Reports in Dermatological Medicine. 2018, p. 1-4 4 p., 3140473.

Research output: Contribution to journalArticle

Open Access
File

Behavior of In Situ Cross-Linked Hydrogels with Rapid Gelation Kinetics on Contact with Physiological Fluids

Diryak, R., Kontogiorgos, V., Ghori, M. U., Bills, P., Tawfik, A., Morris, G. A. & Smith, A., Apr 2018, In : Macromolecular Chemistry and Physics. 219, 8, 6 p., 1700584.

Research output: Contribution to journalArticle

Open Access
File
5 Citations (Scopus)

Behaviour of xyloisosaccharinic acid and xyloisosaccharino-1,4-lactone in aqueous solutions at varying pHs

Almond, M., Shaw, P. B., Humphreys, P. N., Chadha, M. J., Niemelä, K. & Laws, A. P., 1 Dec 2012, In : Carbohydrate Research. 363, p. 51-57 7 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Beyond the "Code": A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora)

Warren, A., Patterson, D. J., Dunthorn, M., Clamp, J. C., Achilles-day, U. E. M., Aescht, E., Al-farraj, S. A., Al-quraishy, S., Al-rasheid, K., Carr, M., Day, J. G., Dellinger, M., El-serehy, H. A., Fan, Y., Gao, F., Gao, S., Gong, J., Gupta, R., Hu, X., Kamra, K. & 36 others, Langlois, G., Lin, X., Lipscomb, D., Lobban, C. S., Luporini, P., Lynn, D. H., Ma, H., Macek, M., Mackenzie-dodds, J., Makhija, S., Mansergh, R. I., Martín-cereceda, M., Mcmiller, N., Montagnes, D. J. S., Nikolaeva, S., Ong'ondo, G. O., Pérez-uz, B., Purushothaman, J., Quintela-alonso, P., Rotterová, J., Santoferrara, L., Shao, C., Shen, Z., Shi, X., Song, W., Stoeck, T., La Terza, A., Vallesi, A., Wang, M., Weisse, T., Wiackowski, K., Wu, L., Xu, K., Yi, Z., Zufall, R. & Agatha, S., Jul 2017, In : Journal of Eukaryotic Microbiology.

Research output: Contribution to journalArticle

Open Access
39 Citations (Scopus)

Bile bilirubin pigment analysis in disorders of bilirubin metabolism in early infancy.

Lee, W. S., McKiernan, P. J., Beath, S. V., Preece, M. A., Baty, D., Kelly, D. A., Burchell, B. & Clarke, D. J., Jul 2001, In : Archives of Disease in Childhood. 85, 1, p. 38-42 5 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)