Department of Biological and Geographical Sciences

Article

Structures of two melanoma-associated antigens suggest allosteric regulation of effector binding

Newman, J. A., Cooper, C. D. O., Roos, A. K., Aitkenhead, H., Oppermann, U. C. T., Cho, H. J., Osman, R. & Gileadi, O., 24 Feb 2016, In: PLoS One. 11, 2, 20 p., e0148762.

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23 Citations (Scopus)

Subdividing mtDNA haplogroup H based on coding-region polymorphisms—a study in Iberia

Pereira, L., Richards, M., Alonso, A., Albarrán, C., Garcia, O., Macaulay, V. & Amorim, A., Apr 2004, In: International Congress Series. 1261, C, p. 416-418 3 p.

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4 Citations (Scopus)

Successive Bacterial Colonisation of Pork and its Implications for Forensic Investigations

Handke, J., Procopio, N., Buckley, M., Van Der Meer, D., Williams, G., Carr, M. & Williams, A., Dec 2017, In: Forensic Science International. 281, p. 1-8 8 p.

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10 Citations (Scopus)

Summary justice or the King’s will? The first case of formal facial mutilation from Anglo-Saxon England

Cole, G., Ditchfield, P. W., Dulias, K., Edwards, C., Reynolds, A. & Waldron, T., 1 Oct 2020, In: Antiquity. 94, 377, p. 1263-1277 15 p.

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2 Citations (Scopus)

Summer sea ice floe perimeter density in the Arctic: high-resolution optical satellite imagery and model evaluation

Wang, Y., Hwang, B., Bateson, A. W., Aksenov, Y. & Horvat, C., 25 Aug 2023, In: Cryosphere. 17, 8, p. 3575-3591 17 p.

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Supplementation practices, perceptions and knowledge about anti-doping among Jamaican high school athletes

Turfus, S., Smith, J., Mansingh, A., Alexander-Lindo, R. & Roopchand-Martin, S., 1 Sep 2019, In: Performance Enhancement and Health. 7, 1-2, 100145.

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4 Citations (Scopus)

Sustained Bauxite Residue Rehabilitation with Gypsum and Organic Matter 16 years after Initial Treatment

Bray, A. W., Stewart, D. I., Courtney, R., Rout, S. P., Humphreys, P. N., Mayes, W. M. & Burke, I. T., 2 Jan 2018, In: Environmental Science & Technology. 52, 1, p. 152-161 10 p.

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78 Citations (Scopus)

Synergy of climate change with country success and city quality of life

Kaklauskas, A., Abraham, A., Kaklauskiene, L., Ubarte, I., Amaratunga, D., Lill, I., Milevicius, V. & Kaklauskaite, U., 15 May 2023, In: Scientific Reports. 13, 1, 16 p., 7872.

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1 Citation (Scopus)

T2ggm: A coupled gas generation model for deep geologic disposal of radioactive waste

Avis, J., Suckling, P., Calder, N., Walsh, R., Humphreys, P. & King, F., 2014, In: Nuclear Technology. 187, 2, p. 175-187 13 p.

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8 Citations (Scopus)

Taxonomic and functional macroinvertebrate diversity of high-altitude ponds in the Macun Cirque, Switzerland

Hill, M. J., Wood, P. J. & Mathers, K. L., 1 Nov 2021, In: Aquatic Conservation: Marine and Freshwater Ecosystems. 31, 11, p. 3201-3214 14 p.

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1 Citation (Scopus)

Technological Innovations for Enhancing Disaster Resilience in Smart Cities: A Comprehensive Urban Scholar’s Analysis

Samarakkody, A., Amaratunga, D. & Haigh, R., 6 Aug 2023, In: Sustainability. 15, 15, 22 p., 12036.

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Te lo dice l'insetto

Translated title of the contribution: The insect tells youVanin, S., Feb 2014, IBC: Informazioni Commenti Inchieste sui Beni Culturali, 22, 2 3 p.

Research output: Contribution to specialist publication › Article

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Temperature dependence of relaxation spectra for highly hydrated gluten networks

Kontogiorgos, V. & Kasapis, S., 1 Jul 2010, In: Journal of Cereal Science. 52, 1, p. 100-105 6 p.

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12 Citations (Scopus)

Temperature Dependence of Relaxation Spectra for Self-Assembled Fibrillar Networks of 12-Hydroxystearic Acid in Canola Oil Organogels

Rogers, M. A. & Kontogiorgos, V., 1 Jun 2012, In: Food Biophysics. 7, 2, p. 132-137 6 p.

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6 Citations (Scopus)

Temporal effects of fine sediment deposition on benthic macroinvertebrate community structure, function and biodiversity likely reflects landscape setting

Mathers, K. L., Doretto, A., Fenoglio, S., Hill, M. J. & Wood, P. J., 10 Jul 2022, In: Science of the Total Environment. 829, 13 p., 154612.

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3 Citations (Scopus)

Texture-sensitive superpixeling and adaptive thresholding for effective segmentation of sea ice floes in high-resolution optical images

Chai, Y., Ren, J., Hwang, B., Wang, J., Fan, D., Yan, Y. & Zhu, S., 1 Jan 2021, In: IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing. 14, p. 577-586 10 p., 9271815.

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2 Citations (Scopus)

The 2015 Chileno Valley glacial lake outburstflood, Patagonia

Wilson, R., Harrison, S., Reynolds, J., Hubbard, A., Glasser, N. F., Wündrich, O., Anacona, P. I., Mao, L. & Shannon, S., 1 May 2019, In: Geomorphology. 332, p. 51-65 15 p.

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31 Citations (Scopus)

The African Diaspora: Mitochondrial DNA and the Atlantic Slave Trade

Salas, A., Richards, M., Lareu, M. V., Scozzari, R., Coppa, A., Torroni, A., Macaulay, V. & Carracedo, A., Mar 2004, In: American Journal of Human Genetics. 74, 3, p. 454-465 12 p.

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Open Access

206 Citations (Scopus)

The Anglo-Saxon migration and the formation of the early English gene pool

Gretzinger, J., Sayer, D., Justeau, P., Altena, E., Pala, M., Dulias, K., Edwards, C., Jodoin, S., Lacher, L., Sabin, S., Vågene, Å. J., Haak, W., Ebenesersdóttir, S. S., Moore, K. H. S., Radzeviciute, R., Schmidt, K., Brace, S., Bager, M. A., Patterson, N., Papac, L., & 60 othersBroomandkhoshbacht, N., Callan, K., Harney, E., Iliev, L., Lawson, A. M., Michel, M., Stewardson, K., Zalzala, F., Rohland, N., Kappelhoff-Beckmann, S., Both, F., Winger, D., Neumann, D., Saalow, L., Krabath, S., Beckett, S., Van Twest, M., Faulkner, N., Read, C., Barton, T., Caruth, J., Hines, J., Krause-Kyora, B., Warnke, U., Schuenemann, V. J., Barnes, I., Dahlström, H., Clausen, J. J., Richardson, A., Popescu, E., Dodwell, N., Ladd, S., Phillips, T., Mortimer, R., Sayer, F., Swales, D., Stewart, A., Powlesland, D., Kenyon, R. A., Ladle, L., Peek, C., Grefen-Peters, S., Ponce, P., Daniels, R., Spall, C., Woolcock, J., Jones, A. M., Roberts, A., Symmons, R., Rawden, A. C., Cooper, A., Bos, K. I., Booth, T., Schroeder, H., Thomas, M. G., Helgason, A., Richards, M., Reich, D., Krause, J. & Schiffels, S., 6 Oct 2022, In: Nature. 610, 7930, p. 112-119 8 p.

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12 Citations (Scopus)

The Arabian Cradle: Mitochondrial Relicts of the First Steps along the Southern Route out of Africa

Fernandes, V., Alshamali, F., Alves, M., Costa, M. D., Pereira, J. B., Silva, N. M., Cherni, L., Harich, N., Cerny, V., Soares, P., Richards, M. B. & Pereira, L., 10 Feb 2012, In: American Journal of Human Genetics. 90, 2, p. 347-355 9 p.

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98 Citations (Scopus)

The Borrelia afzelii outer membrane protein BAPKO0422 binds human Factor-H and is predicted to form a membrane-spanning beta-barrel

Dyer, A., Brown, G., Stejskal, L., Laity, P. R. & Bingham, R., 1 Aug 2015, In: Bioscience Reports. 35, 4, p. e00240

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7 Citations (Scopus)

The Capsaspora genome reveals a complex unicellular prehistory of animals

Suga, H., Chen, Z., De Mendoza, A., Sebé-Pedrós, A., Brown, M. W., Kramer, E., Carr, M., Kerner, P., Vervoort, M., Sánchez-Pons, N., Torruella, G., Derelle, R., Manning, G., Lang, B. F., Russ, C., Haas, B. J., Roger, A. J., Nusbaum, C. & Ruiz-Trillo, I., 14 Aug 2013, In: Nature Communications. 4, 9 p., 2325.

Research output: Contribution to journal › Article › peer-review

Open Access

197 Citations (Scopus)

The COVID-19 Outbreak in Sri Lanka: a synoptic analysis focusing on trends, impacts, risks and science-policy interaction processes

Amaratunga, D., Fernando, N., Haigh, R. & Jayasinghe, N., 1 Dec 2020, In: Progress in Disaster Science. 8, 9 p., 100133.

Research output: Contribution to journal › Article › peer-review

Open Access

21 Citations (Scopus)

The cross-contamination potential of mobile telephones

White, S., Topping, A., Humphreys, P., Rout, S. & Williamson, H., 1 Nov 2012, In: Journal of Research in Nursing. 17, 6, p. 582-595 14 p.

Research output: Contribution to journal › Article › peer-review

11 Citations (Scopus)

The enrichment of an alkaliphilic biofilm consortia capable of the anaerobic degradation of isosaccharinic acid from cellulosic materials incubated within an anthropogenic, hyperalkaline environment

Charles, C. J., Rout, S. P., Garratt, E. J., Patel, K., Laws, A. P. & Humphreys, P. N., 1 Aug 2015, In: FEMS Microbiology Ecology. 91, 8, fiv085.

Research output: Contribution to journal › Article › peer-review

21 Citations (Scopus)

The ESPREssO Action Database: Collecting and assessing measures for disaster risk reduction and climate change adaptation

Baills, A., Grandjean, G., Maspataud, A., Ettinger, S., Abad, J., Dias, N., Albris, K., Hemmers, J., Clegg, G. & Martucci, C., 1 Sep 2020, In: International Journal of Disaster Risk Reduction. 48, 13 p., 101599.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Citations (Scopus)

The evolutionary history of mariner elements in stalk-eyed flies reveals the horizontal transfer of transposons from insects into the genome of the cnidarian Hydra vulgaris

Grace, C. A. & Carr, M., 13 Jul 2020, In: PLoS One. 15, 7, 24 p., e0235984.

Research output: Contribution to journal › Article › peer-review

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5 Citations (Scopus)

The evolution of alkaliphilic biofilm communities in response to extreme alkaline pH values

Charles, C., Rout, S., Jackson, B. R., Boxall, S., Akbar, S. & Humphreys, P., 1 Aug 2022, In: MicrobiologyOpen. 11, 4, 11 p., e1309.

Research output: Contribution to journal › Article › peer-review

Open Access

The First Modern Human Dispersals across Africa

Rito, T., Richards, M. B., Fernandes, V., Alshamali, F., Cerny, V., Pereira, L. & Soares, P., 13 Nov 2013, In: PLoS One. 8, 11, e80031.

Research output: Contribution to journal › Article › peer-review

Open Access

79 Citations (Scopus)

The genomic history of the Iberian Peninsula over the past 8000 years

Olalde, I., Mallick, S., Patterson, N., Rohland, N., Villalba-Mouco, V., Soares Da Silva, M., Dulias, K., Edwards, C., Gandini, F., Pala, M., Soares, P., Ferrando-Bernal, M., Adamski, N., Broomandkhoshbacht, N., Cheronet, O., Culleton, B., Fernandes, D., Lawson, A. M., Mah, M., Oppenheimer, J., & 75 othersStewardson, K., Zhang, Z., Arenas, J. M. J., Moyano, I. J. T., Salazar-García, D. C., Castanyer, P., Santos, M., Tremoleda, J., Lozano, M., Borja, P. G., Fernández-Eraso, J., Mujika-Alustiza, J. A., Barroso, C., Bermúdez, F. J., Mínguez, E. V., Burch, J., Coromina, N., Vivó, D., Cebrià, A., Fullola, J. M., García-Puchol, O., Morales, J. I., Oms, F. X., Majó, T., Vergès, J. M., Díaz-Carvajal, A., Ollich-Castanyer, I., López-Cachero, F. J., Silva, A. M., Alonso-Fernández, C., de Castro, G. D., Echevarría, J. J., Moreno-Márquez, A., Berlanga, G. P., Ramos-García, P., Muñoz, J. R., Vila, E. V., Arzo, G. A., Arroyo, Á. E., Lillios, K. T., Mack, J., Velasco-Vázquez, J., Waterman, A., de Lugo Enrich, L. B., Sánchez, M. B., Agustí, B., Codina, F., de Prado, G., Estalrrich, A., Flores, Á. F., Finlayson, C., Finlayson, G., Finlayson, S., Giles-Guzmán, F., Rosas, A., González, V. B., Atiénzar, G. G., Pérez, M. S. H., Llanos, A., Marco, Y. C., Beneyto, I. C., López-Serrano, D., McClure, S. B., Pérez, M. M., Foix, A. O., Borràs, M. S., Sousa, A. C., Encinas, J. M. V., Kennett, D. J., Richards, M., Alt, K. W., Haak, W., Pinhasi, R., Lalueza-Fox, C. & Reich, D., 15 Mar 2019, In: Science. 363, 6432, p. 1230-1234 5 p.

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238 Citations (Scopus)

The HelQ human DNA repair helicase utilizes a PWI-like domain for DNA loading through interaction with RPA, triggering DNA unwinding by the HelQ helicase core

Jenkins, T., Northall, S. J., Ptchelkine, D., Lever, R., Cubbon, A., Betts, H., Taresco, V., Cooper, C., McHugh, P. J., Soultanas, P. & Bolt, E. L., 1 Mar 2021, In: NAR Cancer. 3, 1, 15 p., zcaa043.

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Open Access

8 Citations (Scopus)

The Holozoan capsaspora owczarzaki possesses a diverse complement of active transposable element families

Carr, M. & Suga, H., 2 Apr 2014, In: Genome Biology and Evolution. 6, 4, p. 949-963 15 p.

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5 Citations (Scopus)

The Human Smoothened Inhibitor PF-04449913 Induced Exit from Quiescence and Loss of Multipotent Drosphila Hematopoietic Progenitor Cells

Giordani, G., Barraco, M., Giangrande, A., Martinelli, G., Guadagnuolo, V., Simonetti, G., Perini, G. & Bernardoni, R., 28 Jul 2016, In: Oncotarget. 7, 34, p. 55313-55327 15 p.

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Open Access

14 Citations (Scopus)

The hyporheic zone as an invertebrate refuge during a fine sediment disturbance event

Milner, T., Jones, J. I., Maddock, I. P. & Bunting, G. C., 1 Sep 2022, In: Ecohydrology. 15, 6, 14 p., e2450.

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The Iliac Crest in Forensic Age Estimation: Evaluation of Three Methods in Pelvis X-Rays

Bartolini, V., Pinchi, V., Gualco, B., Vanin, S., Chiaracane, G., D'Elia, G., Norelli, G-A. & Focardi, M., Jan 2018, In: International Journal of Legal Medicine. 132, 1, p. 279-288 10 p.

Research output: Contribution to journal › Article › peer-review

18 Citations (Scopus)

The Impact of Alkaliphilic Biofilm Formation on the Release and Retention of Carbon Isotopes from Nuclear Reactor Graphite

Rout, S., Payne, L., Walker, S., Scott, T., Heard, P., Eccles, H., Bond, G., Shah, P., Bills, P., Jackson, B. R., Boxall, S. A., Laws, A., Charles, C., Williams, S. J. & Humphreys, P., 13 Mar 2018, In: Scientific Reports. 8, 1, 9 p., 4455.

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Open Access

3 Citations (Scopus)

The Impact of Biofilms upon Surfaces Relevant to an Intermediate Level Radioactive Waste Geological Disposal Facility under Simulated Near-Field Conditions

Charles, C., Rout, S., Laws, A., Jackson, B., Boxall, S. & Humphreys, P., 12 Jul 2017, In: Geosciences (Switzerland). 7, 3, 11 p., 57.

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Open Access

3 Citations (Scopus)

The influence of alcohol content variation in UK packaged beers on the uncertainty of calculations using the Widmark Equation

Maskell, P., Holmes, C., Huismann, M., Reid, S., Carr, M., Jones, B. & Maskell, D., 1 Jul 2018, In: Science and Justice. 58, 4, p. 271-275 5 p.

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8 Citations (Scopus)

The Making of the African mtDNA Landscape

Salas, A., Richards, M., De la Fe, T., Lareu, M. V., Sobrino, B., Sánchez-Diz, P., Macaulay, V. & Carracedo, Á., Nov 2002, In: American Journal of Human Genetics. 71, 5, p. 1082-1111 30 p.

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Open Access

391 Citations (Scopus)

The microbial community profile of a snottite-like biofilm in an abandoned mine drainage tunnel in the Derbyshire Peak District, UK

Mitchell, H., White, J., Gunn, J., Fox, B., Humphreys, P. & Rout, S., 1 Oct 2022, In: Cave and Karst Science. 49, 2, p. 51-56 6 p.

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The mitochondrial DNA tree and forensic science

Richards, M., Apr 2004, In: International Congress Series. 1261, C, p. 91-93 3 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

The Neolithic Invasion of Europe

Richards, M., Oct 2003, In: Annual Review of Anthropology. 32, p. 135-162 28 p.

Research output: Contribution to journal › Article › peer-review

103 Citations (Scopus)

Theory versus Practice in Planning Education: The View from South Africa

Denoon-Stevens, S. P., Andres, L., Jones, P., Melgaço, L., Massey, R. & Nel, V., 1 Apr 2022, In: Planning Practice and Research. 37, 4, p. 509-525 17 p.

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Open Access

9 Citations (Scopus)

The Paleo-Indian Entry into South America According to Mitogenomes

Brandini, S., Bergamaschi, P., Cerna, M. F., Gandini, F., Bastaroli, F., Bertolini, E., Cereda, C., Ferretti, L., Gomez-Carballa, A., Battaglia, V., Salas, A., Semino, O., Achilli, A., Olivieri, A. & Torroni, A., 1 Feb 2018, In: Molecular Biology and Evolution. 35, 2, p. 299-311 13 p.

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Open Access

45 Citations (Scopus)

The role of bicarbonate in regulatory volume decrease (RVD) in the epithelial-derived human breast cancer cell line ZR-75-1

Nicholl, A. J., Killey, J., Leonard, M. N. & Garner, C., 2002, In: Pflugers Archiv European Journal of Physiology. 443, 5-6, p. 875-881 7 p.

Research output: Contribution to journal › Article › peer-review

6 Citations (Scopus)

The role of fine sediment characteristics and body size on the vertical movement of a freshwater amphipod

Mathers, K., Hill, M., Wood, C. & Wood, P., 1 Jan 2019, In: Freshwater Biology. 64, 1, p. 152-163 12 p.

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18 Citations (Scopus)

The sediment fluorescence–trophic level relationship: using water-extractable organic matter to assess past lake water quality in New Zealand

Pearson, A. R., Fox, B. R. S., Vandergoes, M. J. & Hartland, A., 1 Aug 2022, In: New Zealand Journal of Marine and Freshwater Research. 56, 2, p. 213-233 21 p.

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1 Citation (Scopus)

The structure and immunomodulatory activity on intestinal epithelial cells of the EPSs isolated from Lactobacillus helveticus sp. Rosyjski and Lactobacillus acidophilus sp. 5e2

Patten, D. A., Leivers, S., Chadha, M. J., Maqsood, M., Humphreys, P. N., Laws, A. P. & Collett, A., 30 Jan 2014, In: Carbohydrate Research. 384, p. 119-127 9 p.

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41 Citations (Scopus)

The upstream-downstream interface of Sri Lanka’s tsunami early warning system

Haigh, R., Sakalasuriya, M., Amaratunga, D., Basnayake, S., Hettige, S., Premalal, S. & Jayasinghe Arachchi, A., 13 Mar 2020, In: International Journal of Disaster Resilience in the Built Environment. 11, 2, p. 219-240 22 p.

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Open Access

7 Citations (Scopus)

The use of palaeoecological and contemporary macroinvertebrate community data to characterize riverine reference conditions: Determining riverine reference conditions using palaeoecological data

Seddon, E., Hill, M., Greenwood, M., Mainstone, C., Mathers, K., White, J. & Wood, P., 1 Oct 2019, In: River Research and Applications. 35, 8, p. 1302-1313 12 p.

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4 Citations (Scopus)

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