Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS

Simon Rout, Zohier Salah, Christopher Charles, Paul Humphreys

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

The ability of micro-organisms to degrade isosaccharinic acids (ISAs) while tolerating hyperalkaline conditions is pivotal to our understanding of the biogeochemistry associated within these environs, but also in scenarios pertaining to the cementitious disposal of radioactive wastes. An alkalitolerant, ISA degrading micro-organism was isolated from the hyperalkaline soils resulting from lime depositions. Here, we report the first whole-genome sequence, ISA degradation profile and carbohydrate preoteome of a Macellibacteroides fermentans strain HH-ZS, 4.08 Mb in size, coding 3,241 proteins, 64 tRNA, and 1 rRNA.
Original languageEnglish
Pages (from-to)2140-2144
Number of pages5
JournalGenome Biology and Evolution
Volume9
Issue number8
DOIs
Publication statusPublished - 16 Aug 2017

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genome
Genome
acids
acid
Radioactive Waste
microorganisms
biogeochemistry
Transfer RNA
radioactive waste
lime
carbohydrate
Soil
Carbohydrates
ribosomal RNA
carbohydrates
degradation
protein
isosaccharinic acid
soil
Proteins

Cite this

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abstract = "The ability of micro-organisms to degrade isosaccharinic acids (ISAs) while tolerating hyperalkaline conditions is pivotal to our understanding of the biogeochemistry associated within these environs, but also in scenarios pertaining to the cementitious disposal of radioactive wastes. An alkalitolerant, ISA degrading micro-organism was isolated from the hyperalkaline soils resulting from lime depositions. Here, we report the first whole-genome sequence, ISA degradation profile and carbohydrate preoteome of a Macellibacteroides fermentans strain HH-ZS, 4.08 Mb in size, coding 3,241 proteins, 64 tRNA, and 1 rRNA.",
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Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS. / Rout, Simon; Salah, Zohier; Charles, Christopher; Humphreys, Paul.

In: Genome Biology and Evolution, Vol. 9, No. 8, 16.08.2017, p. 2140-2144.

Research output: Contribution to journalArticle

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KW - Obligate anaerobe

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